switchBox - Utilities to train and validate classifiers based on pair switching using the K-Top-Scoring-Pair (KTSP) algorithm
The package offer different classifiers based on comparisons of pair of features (TSP), using various decision rules (e.g., majority wins principle).
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softwarestatisticalmethodclassification
4.26 score 1 dependents 500 downloadsGSReg - Gene Set Regulation (GS-Reg)
A package for gene set analysis based on the variability of expressions as well as a method to detect Alternative Splicing Events . It implements DIfferential RAnk Conservation (DIRAC) and gene set Expression Variation Analysis (EVA) methods. For detecting Differentially Spliced genes, it provides an implementation of the Spliced-EVA (SEVA).
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generegulationpathwaysgeneexpressiongeneticvariabilitygenesetenrichmentalternativesplicing
4.06 score 19 scripts 528 downloadsGSBenchMark - Gene Set Benchmark
Benchmarks for Machine Learning Analysis of the Gene Sets. The package contains a list of pathways and gene expression data sets used in "Identifying Tightly Regulated and Variably Expressed Networks by Differential Rank Conservation (DIRAC)" (2010) by Eddy et al.
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microarraydatadatapkg
3.38 score 12 scripts